Microsatellites database

Microsatellites /Tandem Repeats database

Genome: Burkholderia xenovorans LB400 chromosome 1

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | **0.2**
Position	Sequence
9482	CCGAGGACA-TCGAGGACA-TCGAGGACA	Design primers
18310	AAGGCCACAAAGGCCGCAAAGGCCACA	Design primers
34495	CGCCTGATGGACGACGCCTGATGGTTGACGCCTGATGGCCCA	Design primers
47016	GCCGAGAAGCAGGCTGAGAAGCAGGCTGAGAAGCGG	Design primers
115214	ACCACGACGCA-GCCATGACCCA-ACCATGACCCA-ACCACGACCCA-ACCACGACCCA-CCCACGACCCA-CCCACGACCCA-CCCACGACCCA-CCCACGACCCA-CCCACGACCCA	Design primers
127651	CGCCGT-CGGCGC-CACCGC-CACCGC-CACCGC-CACCGC-CACCGC-CACCGC-CACCGC-CACCGC-CACCGC-CACCGC	Design primers
127724	ACCGCC-ACCGCC-ACCGCC-ACCGGC	Design primers
140461	TGCCGTTGCCGCTGTCGTCGCCGT	Design primers
157044	CCTTGGGTGCCTTTGGTGCCTTGGATG	Design primers
165266	GGTGGG-GGTTGG-TGTCGG-TGTTGG-TGTTGG-TGTTGG-TGTTGG-TGTTGG-TGTTGG-TGTTGG-TGTCGG-TGTCGG	Design primers
167081	TCGGC-TCAGC-TCAGC-TCGGC-TCAGC	Design primers
204814	CAACCATG-CAACCACG-CAACCACG-CAACCACG	Design primers
216689	CGGCCAGCA-CGGCCGACA-CGGCCGACA-CGGCCAACA-CGGCCAACA-CGGCCAACA	Design primers
216758	GCGTAGCGGACGCAGCGGACGCAGCGGACGCAGCGGACGCAGCGGACGCAGCCG	Design primers
216813	CGCAGCCAG-CACAGCCAG-CACAGCCAG-CACAGCCAG	Design primers
218712	CGCCGCGACGCGCCGCACCGCGCTG	Design primers
235873	CCCGCGCCCGAGCCCGCACCCGCA	Design primers
277595	AGCTGTGGAGCAGCTATGAAGCAGCTATGAAGC	Design primers
277640	CAAGCAAGGCACGCGCAAGGCACAGGCGAGGCACAAGCGAGGCA	Design primers
282964	TTGACTGGC-TGAATTGGC-TGAATTGGC-TGAATTGGC-TGAATTGGC-TGAATTGGC	Design primers
283032	TCGCGGAACTGGCGGAACTGGCGGAAC	Design primers
291349	TCCCGCC-TCACGCC-TCACGCC-TCACGCC-TCACGCC	Design primers
291385	TACGCCT-CGCACCT-CGCACCT-CGCACCT-CGCACCT-CGCACCT-CGCACCT-CGCACCT-CGCACCT	Design primers
315824	GCCGGCTATTGCAGCCGGCTAATGCCGTTGGCTATTGCA	Design primers
390853	ACAAGGCAACCGCGAGGCAACCGCAGGGCAACC	Design primers
458916	CCGGCGCCCGCGCCGGCTCCGGCC	Design primers
467927	GCCACGGCACGG-CACACGGCACGG-CACACGGCACGG	Design primers
478925	GTTCGGTGCGGCCGGCTAGGTGCGGCCGGTTAGGTGCGGCCG	Design primers
487179	TTGGCGC-CAAACGC-CAAACGC-CAAACGC-CAAACGC-CAAACGC-CAAACGC-CAAACGC-CAAACGC-CAAACGC-CAAACGC-CAAACGC	Design primers
494143	CCTTGCACGTTCGTTGCGCGTTCGTTGCGCGTT	Design primers
495200	CCCGAATTCATCACCCGCGAATTCGTCGCCCCCGAATTCGTTACCCCCGAATTCATCGCC	Design primers
530320	GAACCGACCGACAAGCCGACCGACAAGCCGACCGAC	Design primers
530394	ATCTGCCGCGAAAGCCGCCGCGAAAGCCGCCGCGAA	Design primers
533990	CGCATGACGCATCACGCTTGACGCGTGA	Design primers
537528	AGGGCTTTGCG-CCGGCTTTGCG-CCGGCTTTGCG	Design primers
548716	GCGGCCGCCGCCGCCGCCGCTGCC	Design primers
553575	GT-GA-GC-GC-GA-GC-GT-GC-GC-GT-GA-GC	Design primers
610071	CTGTTGCTGTTCCTGCTGCTGTTC	Design primers
610153	TCCTGCTGCTGTTGCTGTTGCTGTTGCTGCTGCTGT	Design primers
618586	GTAGCCCGCAACG-GCACCCCGCAACG-GCACCCCGCAACG-GCACCCCGCAACG-GCACCCCGCAACG	Design primers
641828	AAGACGCAAACAACAGGCGCAAACAACAGGCGCAAACAA	Design primers
707485	CACCGGACGACACCCGATGACACCAGACGC	Design primers
711639	AAGGCCATCA-AGGCCCATCA-AGGCCCATCA-AGGCCCATCA-AGGCCCATCA	Design primers
718104	CGTGTGGTGTCGTGTCGTGTCGTGA	Design primers
720135	CGCCGCGA-TGCCGCGA-TGCCGCGA-CGCCGCGA	Design primers
739422	CCACGCCCGCGCCCACGGCCACGC	Design primers
822151	AGGGGCGTCAACGGGCGTCAACGGGCGCCA	Design primers
827614	TTGCGATTGCGTATGCGATTGTGA	Design primers
846440	CCGCTTGCG-CCGCTTGCG-CCGCTTGTG	Design primers
848861	ACATCGACTTCGGCATCGACACCG	Design primers
860571	CCAAAA-CCAGAA-CCAGAA-CCAGAA	Design primers
869074	GGTGTT-GGTGTT-GGTGTT-GGTGTT	Design primers
869131	CTCGGA-GTTGGT-GTCGGA-CTCGGA-CTCGGA-CTCGGA-CTCGGA-CTCGGA-CTCGGA-CTCGGA-CTCGGA-CTCGGA	Design primers
916587	ACTGACA-ACGGCTT-ACGGCTT-ACGGCTT-ACGGCTT-ACGGCTT-ACGGCTT-ACGGCTT-ACGGCTT-ACGGCTT-ACGGCTT-ACGGCTT	Design primers
916688	ACTCGGAACTCGAAACTCGAAACTCTGA	Design primers
919640	GGACGAACAGGATCGACACGAACAGGGTCGCGACGAGCATGATCG	Design primers
975641	CGATCAGGATCACGATGACGAGCA	Design primers
1084487	ACCGCCGCGCCGACGCCCGCGCCGATCGCCGCGCCC	Design primers
1120379	GGTATCTGTATCGGTCTCGGTCTC	Design primers
1143889	CGGCAT-TGGCAT-TGGCAT-TGGCAT	Design primers
1151275	GAGCGGATCGAAGCGGAGCAGATCG	Design primers
1154611	CGCGAGTTCA-GGCGAGTTCA-GGCGCGTTCA	Design primers
1178749	TCCGGCTGCGGCTCCGGCTCCGGC	Design primers
1197760	CAGCGGACCAGGCAGCGGACCGAGCAGCGGACCGAG	Design primers
1200119	CCGATTCGCATCGATTCGTATCGATTCGCA	Design primers
1207363	CGGACCGCTTCCTGGCCGCTTCCTGGCCGCTTC	Design primers
1244483	CGCGCTCATAGCGCTCATGGCGCTCAT	Design primers
1257356	TACGGC-TACGGC-TACGGC-TACGGC-TACGGC-TACGGC	Design primers
1287818	TGCGAT-GCAGGT-GCAGGT-GCAGGT-GCAGGT-GCAGGT-GCAGGT-GCAGGT-GCAGGT-GCAGGT-GCAGGT-GCAGGT	Design primers
1288664	CCCACAGCA-CCCGCAGCA-CCCGCAGCA-CCCGCAGCA	Design primers
1331318	ACGGGCGTGACGGGTGTGAGGGGCGTG	Design primers
1331511	CGCAACCCGCAATCCGCACCCCGCAACC	Design primers
1340521	CCGTGAACCCGCGAACCCGCGAAC	Design primers
1345649	GCCGTTCGCGGTGGCCGCCATTTGCGGTGGCCGCCATTTGCGGTGTCC	Design primers
1361748	CGGCGAAGTGAAGCGGCGGTGAAGCGGCAGTGAAGCGGCGGTGAAGCGGCAGTGAAGCGGCGGTGA	Design primers
1391926	AGC-CGC-GGC-AGC-GGC-GGC-AGC-AGC-GGC	Design primers
1393763	GCACGG-CCACGG-CCACGG-CCACGG	Design primers
1459525	GCTTCAAAGCAACGTTTCAACGCAACGTTTCAACGCAAC	Design primers
1470394	AAGAGGCCGCAAATGGCCGCGAAAGGCCGC	Design primers
1473982	GGCAGC-GCCAAC-GCCAAC-GCCAGC-GCCAGC-GCCAGC-GCCAGC-GCCAAC-GCCAAC	Design primers
1478868	TCGCCG-ACGCCG-ATGCCG-ATGCCG-ACGCCG-ATGCCG-ATGCCG-ATGCCG-ATGCCG	Design primers
1478923	CGACAGCGC-CGACAGCGC-CGACAGCAC-CGACAGCAC-CGACAGCAC-CGACAGCAC-CGACAGCAC-CGACAGCAC-CGACAGCAC	Design primers
1479010	CGCCGACAG-AGCCGACAG-AGCCGACAG	Design primers
1498419	GGTGGCGGGCATGGTGGCGGGGCTGGTGGTGTGCAT	Design primers
1511279	TCGAGCTCGTGCTCGAGCTCGCGC	Design primers
1530469	CGA-GGA-CGA-TGA-CGA-CGA-CGA-GGA	Design primers
1577677	TAAGCAG-CAAGCAG-CAAGCAG-CAAGCAG	Design primers
1582326	CGCTCGTCACTCACGTCACTCACGTCACTCACGTCACTCACGTCACTCACCTCA	Design primers
1642045	AACAGCAACACCAGCACGAACACCAACACGAACACGAACAGCAACACCAGCACG	Design primers
1653988	AGGCGCGTGAGAAGCGAGTGAGAAGCGCGTGAA	Design primers
1659987	GCG-GCG-GGG-GCG-GCG-GAG-GCG-GCG	Design primers
1713487	CACCACCATCACCACCAGCGCCAC	Design primers
1753331	AGATGGC-AAATGGC-AAATGGC-AAATGGC-AAATGGC	Design primers
1766640	GCGTCGGCGTCCGCATCGGCGGCG	Design primers
1794706	GCACCGCTTGCGCCACCGCTTGAGGCAGCGCTTACG	Design primers
1809475	GCGGACG-ACGGACG-GCGGACG-GCGGACG	Design primers
1814717	AGCCCGGCGCCCTTAACCCGGCACCCTTAACCCGGCACCCTT	Design primers
1814760	CCCGGCACCCTTA-ACCGGCACCCTTA-ACCGGCACCCTTA-ACCGGCACCCTTA	Design primers
1814813	CCCGGCGCCCTTAA-CCCGGCGCCCTTAA-CCCGGCACCCTTAA	Design primers
1817458	GGCCAAAGTGGCCGAAGTGGCCAAAGT	Design primers
1819767	CGTGGCCGTTGAGCAGTGGCCGTCGAGCAGTGGCCGTCGAGC	Design primers
1848338	CCCGAGCCCGAACCTGAGCCCGAG	Design primers
1864203	GCTGCCGCC-GTTACCACC-GTTACCACC-GTTACCACC-GTTACCACC-GTTACCACC-GTTACCACC-GTTACCACC	Design primers
1864429	TCGCGCGGTTCACGCGGTTCGCGCGGC	Design primers
1879198	CCGCCG-ATGCCG-ATGCCG-ATGCCG-ATGCCG-ATGCCG	Design primers
1910134	CATATCATTTCATGTGATATGATAT	Design primers
2100924	GCGGAAAAG-ACGGATCAG-ACGGATCAG-ACGGATCAG-ACGGATCAG-ACGGATCAG	Design primers
2128888	CTTCA-CTTCG-CTTCG-GTTCA-CTTCG	Design primers
2139003	CGCGTGACC-GGCGTGACC-GGCGTGACC-GGCGTGACC	Design primers
2155914	TGAAACGAAGAAGAAACAAAGATGAAGCAAAGA	Design primers
2164184	AGGTGAGCTACTGTGAGCTACGATGAGCTA	Design primers
2171839	CGGAGCCGGAACTGAAGCCGGAACTGAAGTCGGAACTGAAGCCGGAACTGAAGCAGGAACTGAAGCAGGAACCGAAGCAGGAACCGAAGCAGGAAC	Design primers
2196053	GCA-GCA-GCA-ACA-GCA-GCA-ACA-GCA-GCA-ACA-GCA-GCA	Design primers
2198699	TACTT-GGCTC-GGCTC-GGCTC-GGCTC-GGCTC-GGCTC-GGCTC-GGCTC	Design primers
2202964	TCAGTGGAATGAC-TCAGTGGAATGAC-TCAGTGGAATAGC-TCAGCGGAATAAC	Design primers
2227722	CGTCGACGTCGCCGGCGAAGTCGA	Design primers
2273943	CGCCGGCCGTCGCGTGCCGTCGCCGTCCGT	Design primers
2280646	AGACAGCCCGA-AGCAGCCCCGA-AGCAGCCCCGA-AGCAGCCCCGA-AGCAGCCCCGA-AGCAGCCCCGA	Design primers
2321786	GTGCAGATGCAGGAGCAGATGCAG	Design primers
2328557	CCGGCAAGC-ACGGCAAGC-ACGGCAAGC	Design primers
2337939	CCGCCACCGTGACCCCGGC-CCGCCACCGTGACCCCGGC-CCGCCGCCAAGACCCCGGC-CCGCCGCCAAGACCCCGGC	Design primers
2343740	TCGGCTCCGGCATCGGCGCCCGCATCGGCTTCGGCG	Design primers
2407200	GAACGCACC-GATCGTACC-GATCGTACC-GATCGTACC-GATCGTACC-GATCGCACC	Design primers
2409478	GGCCCAGGCGGCCCAGTCGGCCCAGGCCGCCCAGGC	Design primers
2428813	TGCATCGACGCAAGCATCGACTCAGGCATCGGCGCA	Design primers
2460681	CGTCCGCGTCCACGGCCGCGACCG	Design primers
2468547	CTCTGC-GTGTGC-GTGTGC-GTGTGC-GTGTGC-GTGTGC	Design primers
2478805	AGTGGTGTGGCGTGGAGCGGAGTAG	Design primers
2486929	CAGTTCAGCCGCGAGTTCAGGCGCCTGTTCGGCCGC	Design primers
2487051	AACGGGCTAATGGGCTAACGAGCTAACGGGCT	Design primers
2510790	CAAGGACTCGATGGCCAAGGATTCCATGTCCAAAGATTCGATGGCCAAGGACTCCATGTC	Design primers
2535530	GC-GC-AC-GC-CC-GC-AC-GC-TC-GC-AC-GC	Design primers
2535579	ACGCAAAAACGCGCACAAACACGCACAAAC	Design primers
2565572	GCGGACGCGAACGCGAACGCGGCC	Design primers
2574675	GGACATCAAGCGGACATCGAGCAGCCATCAAGC	Design primers
2577767	CAGACCGAAGCGCAGAGCCAAGCGCAGAGCCAAGCG	Design primers
2595780	GAATTCAGCGCCAATTCAGCACTAATTCAGCAC	Design primers
2606706	GCCGATTCCAGGCTATTCCAGGCTATTCCA	Design primers
2617277	TACCGATTGCGATCCCGATTGCGATCCCGATTTCGA	Design primers
2627593	CCGACGTGACCGATGTGACCGACGTCA	Design primers
2643819	AGCTATTGCACGAGTTTTTGCACGAGTTACTGCACG	Design primers
2656034	CGCCCTTTTGCTT-ATCCCTTTTGCTT-ATCCCTTTTGCTT-ATCCCTTTTGCTT-ATCCCTTTTGCTT	Design primers
2689056	CGAAGTCAGCGGCGAAGTCGGCCGCGAAATCAGCGG	Design primers
2692191	ACAGGCTGTGCCTGGCTGTGCCTGGCTGTG	Design primers
2711838	GCC-CCC-GCC-TCC-GCC-GCC-GCC-CCC	Design primers
2720678	TCGCGCCAC-TCGCGCCAC-TCGCGCCGC	Design primers
2737763	CTCGTGGTTCGGCTTGTGGTGCGGCTTGTGGTTCGGCTTGTGGTTCGG	Design primers
2741231	TGGCGTGCC-TGGCGTTTA-TGGCGTTTA-TGGCGTTTA-TGGCGTTTA-TGGCGTTTA	Design primers
2769593	CAGCAGCAGCCGCAGCAGCAGCCG	Design primers
2808930	GCCCGCGTCGGCACCTGCGTCGGCACCCGCTTCGGC	Design primers
2823401	CTGTTTGTCCTGTTTGCCCTCTTTGTC	Design primers
2835300	GGACGCCGTTGCGTCGCCGTTGCGTCGCCGTTG	Design primers
2873079	CATACCTCGATATATCTCGATATACCTCGA	Design primers
2878172	TGGACTAC-CGGACTAC-CGGACTAC	Design primers
2923774	TTCGCCTACGCCTTCGCCTTCGTC	Design primers
2935007	ACTGGCGCCTTTACGCCGAAAACGCCATGGCTCCTTTACGCCGAAAATCCGGTGGCGCCATTACGCCGGAAACGA	Design primers
2935112	AGCTGTG-AGATGTG-AGATGTG-AGATGTG-AGATGTG	Design primers
2989702	GCGGTGGTGGTGGCGGCGCCGGTG	Design primers
3057780	CACGACCACGCCCCCGACCACCAC	Design primers
3057944	CGACTCAAGCGCAATTCAAGCGCAATTCAAGCG	Design primers
3062661	GGAGTCGTT-CGAGTCGTT-CGAGTCGTT	Design primers
3079433	CGGCTTGGATGGCGGCGCGGATGGCGGCGCGGATGG	Design primers
3079471	GCGTGGATAACTGAGAGGATAACTGCGCGGATGACT	Design primers
3082961	GGCCTGAAGCG-GCTCTGAAGCG-GCTCTGAAGCG-GCTCTGAAGCG	Design primers
3087099	TTTTGTCGGCTTCAATCTTGTCCGCCTCAATCTTGCCGGCTTCAA	Design primers
3093619	GCGCGGATG-TCGCGGATG-TCGCGGATG-TCGCGGATG	Design primers
3093656	TGCAGGTGA-TGCAGGTGA-TGCAGGCGA	Design primers
3093684	ACAGGCGAT-ACAGGCGAT-ACAGGCGAT	Design primers
3106075	CGG-CGG-CGG-AGG-TGG-CGG-CGG-CGG	Design primers
3116652	ACGCCGTTACGCGCCATTACGCGCCGTTAC	Design primers
3119874	CCGGCTAG-CTGGCTAG-CTGGCTAG-CTGGCTAG	Design primers
3129871	GCTGCTGCTTCGGCACCGGCTGCTGCAGCTTCGGATTCGGCTGCTGCTGCTTCGGGTGCTGCT	Design primers
3142402	CCGATT-GCAGTT-GCAGTT-GCAGTT-GCAGTT-GCAGTT-GCAGTT-GCAGTT-GCAGTT	Design primers
3162200	GCCCTGGTTGCC-GCTGTGGTTGCC-GCTTTGGTTGCC-GCTTTGGTTGCC-GCTTTGGTTGCC	Design primers
3179455	GCAGTT-TCAGTT-CCAGTT-CCAGTT-CCAGTT-CCAGTT-CCAGTT-CCAGTT	Design primers
3237057	GTGGCGGCTTG-ATTGCGGCTTG-ATTGCGGCTTG-ATTGCGGCTTG-ATTGCGGCTTG	Design primers
3237118	GCTGGTCGTTG-CCTGGTCGTTG-CCTGGTCGCTG-CCTGGTCGCTG-CCTGGTCGTTG	Design primers
3248655	GCGGCGACT-GCGGCGACT-GCGGCGGCT	Design primers
3294852	TGCCAGGAAAGGCGAGGAAAGGCGAGGAAA	Design primers
3300084	TCGCGCTCGCTCGCGCGCTCGCGG	Design primers
3302087	CGGATAGCCGGATAACCGGATAAC	Design primers
3312885	ATGTTCGGGCGGAT-GGGTTCGGGCGGAT-GGGTTCGGGCGGAT-GGGTTCGGGCGGAT-GGGTTCGGGCGGAT-GGGTTCGGGCGGAT	Design primers
3316844	CCCGTCTTTCGCGTCTTTCGCGTCTTT	Design primers
3319273	GGGCCGGGGCGGGCCGGATCGGGGCGGGTCGGGGCGGGTC	Design primers
3321042	ATGCGGCCGCACGAGGTGGCCGCACGAGGTGGCCGCACG	Design primers
3323814	CCACCCCGGCCAGCCCGGCCACTCCGG	Design primers
3326998	GGGCGCTGCTTGAGGGTCGTCACTGCTTGAGGGTCGTCACTGCTTGAGGGT	Design primers
3327336	GCACCTGATGCACCGGATGCACCGGAT	Design primers
3346493	TGCGTCGAT-GGCGTCGAT-GGCGTCGAT	Design primers
3362636	CGCGCCGCCGCGCCGGCTCGCCGC	Design primers
3372992	AGAATGCTCGTGGGGATGCTCGTGGGGATGCTCGTG	Design primers
3406946	TAGGACAGCCCAGGACGGCCTAAGACAGCC	Design primers
3439424	ATGCGCAGGCGCATGCGCATGCGG	Design primers
3466329	AGGCGT-TGGCGT-TGGCGT-TGGCGT-TGGCGT	Design primers
3474142	TGCGCTCGGTCTGCGTTCGGTCTGCGCTCAATC	Design primers
3474855	CGGCGT-GGGCGT-GGGCGT-GGGCGT	Design primers
3474899	GCG-GCG-GTG-GCG-GTG-GCG-GTG-GCG-GTG-GCG	Design primers
3474930	GGGCGGTGG-GGGCGGTGG-GGGCGGCGG	Design primers
3495060	TCGGGTTCGCC-GCGGGTTCGTC-GCGGGTTCGTC-GCGGGTTCGTC	Design primers
3500709	ACGCATTG-GCGCGTTG-GCGCGTTG-ACGCATTG-ACGCATTG-ACGCATTG-ACGCATTG-ACGCATTG-ACGCGTTG	Design primers
3500782	GGCGTTGA-GGCGTTGA-GGCGTTGA-GGCGTTGA-AGCGTTGA-AGCGTTGA-AGCGTTGA-AGCGTTGA	Design primers
3510784	GGCTTCAACC-GGCTTCAACC-CGCTTCAATC	Design primers
3521997	TGCGTGTG-TGTGGGGC-TGTGGGGC-TGTGGGGC-TGTGGGGC-TGTGGGGC-TGTGGGGC-TGTGGGGC-TGTGGGGC-TGTGGGGC-TGTGGGGC-TGTGGGGC	Design primers
3522097	GCGGCTGGT-GCGGCTGGC-GGGGCTGGC-GGGGCTGGC-GGGGCTGGC-GGGGCTGGC-GGGGCTGGC-GGGGCTGGC-GGGGCTGGC-GGGGCTGGC-GGGGCTGGC-GGGGCTGGC	Design primers
3632504	CCAACTCGCTGCGCG-CCAGCTTGCTGTGCG-CCAGCTTGCTGTGCG-CCAGCTTGCTGTGCG	Design primers
3684420	TTCGTC-CTCGTC-CTCGTC-CTCGTC	Design primers
3694539	CCGGTTTGGCTTCGGCCACTTTGGCTTCGGCCGCTCTGGTTTCGG	Design primers
3718171	CGCGTGAAGCGCGCGAAGGGCGTGAAG	Design primers
3731425	CTGTGGTGTGAAGCGGCGGTGTGAAGCGGCGGTGTGAAG	Design primers
3734597	GCCACA-GCAACA-GCAACA-GCAACA	Design primers
3740259	GC-GC-AC-TC-GC-GC-AC-AC-CC-GC-GC-CC-AC-AC-GC	Design primers
3751111	GCGCCGGGC-GGGCCGGGC-GGGCCGGGC-GGGCCGGGC-GGGCCGGGC	Design primers
3752066	AGGTATGC-AGGTATGC-AGGCATGC	Design primers
3765533	TGTGTTCGCTGTGTTTGCTGTGTTCGC	Design primers
3826119	TGGCCGGCGTGGTTGTGACTGCCGTGGTTGTGACTGCCGTGGTTG	Design primers
3833588	CCCAAAAAATCCCAAGGAATCCCCAAGAAT	Design primers
3912497	AGGCGT-CGGCGT-CGGCGT-CGGCGT	Design primers
3961423	CTCTCACGCTTTCACGCTTTCACG	Design primers
4011920	TGGAAGCAGTGGCGG-CGGAAGCAGTGGCGG-CGGGAGCAGCGGCGG-CGGGAGCAGCGGCGG-CGGAAGCAGCGGCGG-CGGAAGCAGCGGCGG-CGGAAGCAGCGGCGG-CGGAAGCAGCGGCGG-CGGAAGCAGCGGCGG-CGGAAGCAGCGGCGG-CGGAAGCAGCGGTGG-CGGAAGCAGCGGCGG-CGGAAGCAGCGGCGG-CGGAAGCAGCGGCGG-CGGAAGCAGCGGCGG-CGGAAGCAGCGGCGG-CGGAAGCAGCGGCGG-CGGAAGCAGCGGCGG-CGGAAGCAGCGGTGG-CGGAAGCAGCGGCGG-CGGAAGCAGTGGCGG	Design primers
4012259	CGGCGCCGGTGCAGGCGCCGGTGC	Design primers
4012344	GGCGGCGGCTTCGGTGGCGGTTTCGGCGGCGGCTTTGGCGGAGGCTCC	Design primers
4021514	TCGCGC-TCGCGC-CCGCGC-TGGCGC	Design primers
4023259	TTCCGGCGTGCT-CACCGGCGTGCT-CACCGGCGTGCT	Design primers
4051879	AAGGGCAAGCGCAAGGGCAAGCGC	Design primers
4076808	GCTCGGCGCGGCGCGGCTCGGCTGG	Design primers
4090145	AACACGATCACGAGCACGAACACG	Design primers
4091057	AAGACGAAAACGAGGACGAAGGCG	Design primers
4105699	GCACGAGTG-GCACGAGTG-GCACGAGCG	Design primers
4111971	CCTGCCTCA-CTTGCCTCA-CTTGCCTCA-CTTGCCTCA	Design primers
4127883	GTTTGCGTTTCGGTTTGCATTTGGGTTTGCGTCGCG	Design primers
4129989	GCCGCTGTCGAGGCCGCTGTCGATGCCACCGTCGAG	Design primers
4152242	GCCTGAGCCGCTTGAGCCGCTTGAGCC	Design primers
4153220	GCGGCGGCGGCGGGGGCGGCGGAGGCGGAG	Design primers
4167150	TTTTGCGCTGAGGTTTTGCGTTGAGCCTTTGCGTTGAGG	Design primers
4186753	AGCGACGGCAACC-CGCGACGGCAACC-CGCGACGCCAACC	Design primers
4190337	CAACCCGCTTCCAGCCCGCTTCCGACCCACTTC	Design primers
4272830	GGTCAAGGA-CGTCAAGGA-CGTCAAGGA	Design primers
4298265	GGTGCCGCCGGCGTAGCTGCGGCCGGTGTAGGTGCGGCCGGCGTA	Design primers
4301727	CCTTCTTCGCCGCAACCTTCTTCACCGCGACTTTCTTGGCTGCAACCTTCTTGGCCGGAG	Design primers
4307568	TTATACACTCGGTTATGCACTTGGTTATTCACACGG	Design primers
4372801	CGGCAACCCCGCGGCAGCCCCACGGCAAGCTCG	Design primers
4390101	CACCGCCGCCCAGCGCCACCCACCGCCGCT	Design primers
4432495	CCGCTCAGTTGCCGCTCAGCCGTCGCTCAGTCG	Design primers
4456658	CCAGGCGAACTAGGCGAACCAGGCGAG	Design primers
4574195	ACCGCCTCAAACCAGCCTCAAACCAGCCTCAAA	Design primers
4677758	CAAAAC-CAAAAC-AAAAAC-CAAAAA	Design primers
4707015	CTCACG-CTCGGT-CTCGGT-CTCGGT-CTCGGT-CTCGGT-CTCGGT-CTCGGT-CTCGGT	Design primers
4707070	TCGATCTCGGTCTCGATCTCGGTC	Design primers
4733206	CGCCGGCGTCGGCGCCGTGGCCGG	Design primers
4746646	CGGGTGCAACGGGCGCAACGGGTGCAA	Design primers
4762322	GCCGCATT-CCCGCATT-CCCGCATT	Design primers
4811979	TTCTTTGCTGCTACTTTTTTGCTGCCACTTTTGTGCTGCTAC	Design primers
4874114	TCGTTG-CCGTTG-CCGTTG-CCGTTG	Design primers
Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2

Position

Sequence

9482

CCGAGGACA-TCGAGGACA-TCGAGGACA