Microsatellites /Tandem Repeats database

Genome: Jannaschia sp. CCS1

Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
1521776CAGTTTTCA-CGGTTTTCA-CGGTTTTCA-CGGTTTTCA-CGGTTTTCA-CGGTTTTCADesign primers
1605503CACCTGCACCGGCGCCAG-CACCTGCACCGGCGCCAG-CTCCTGCACCGGCGCCAGDesign primers
1664497GACGCATATTGGATGGCGCATATTGGATGGCGCATATTGGATDesign primers
2163346AGGTTGCA-AGGTTGCA-AGGTTGCADesign primers
2865205CCAGGC-CCAGGC-CCAGGC-CCAGGCDesign primers
3547793TAACGCACCTTCGGTGCAACTGCT-CAACGCACCTTCGGTGCAACTGCT-CAACGCACCTGCGGTGCAACTGCT-CAACGCACCTGCGGTGCAACTGCTDesign primers
3712788CGCCCGTG-AGGCCGTG-AGGCCGTG-AGGCCGTG-AGGCCGTG-AGGCCGTG-AGGCCGTG-AGGCCGTG-AGGCCGTG-AGGCCGTG-AGGCCGTG-AGGCCGTG-AGGCCGTG-AGGCCGTG-AGGCCGTGDesign primers

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