Microsatellites /Tandem Repeats database

Genome: Jannaschia sp. CCS1

Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
1521778GTTTTCACG-GTTTTCACG-GTTTTCACG-GTTTTCACG-GTTTTCACG-GTTTTCACGDesign primers
1664499CGCATATTGGATGG-CGCATATTGGATGG-CGCATATTGGATGGDesign primers
2163346AGGTTGCA-AGGTTGCA-AGGTTGCADesign primers
2865205CCAGGC-CCAGGC-CCAGGC-CCAGGCDesign primers
3547828CGGTGCAACTGCTCAACGCACCTG-CGGTGCAACTGCTCAACGCACCTG-CGGTGCAACTGCTCAACGCACCTGDesign primers
3712791CCGTGAGG-CCGTGAGG-CCGTGAGG-CCGTGAGG-CCGTGAGG-CCGTGAGG-CCGTGAGG-CCGTGAGG-CCGTGAGG-CCGTGAGG-CCGTGAGG-CCGTGAGG-CCGTGAGG-CCGTGAGG-CCGTGAGG-CCGTGAGGDesign primers

Please help us improve this resource by reporting problems, suggestions etc.