This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 241675 | CACCGCAGCGCA-GACCGCAGCGCA-GACCGCAGCGCA | Design primers |
| 438857 | GTTTGTCCT-GTTTGTCCT-GTTTGTCCT | Design primers |
| 448845 | TGTCACT-AGTCACT-AGTCACT-AGTCACT-AGTCACT-AGTCACT-AGTCACT-AGTCACT | Design primers |
| 448902 | GTCCCTT-GTCCCTT-GTCCCTT-GTCCCTT-GTCCCTT-GTCCCTT-GTCCCTT-GTCCCTT-GTCCCTT | Design primers |
| 448966 | TCACTCC-TCACTCC-TCACTCC-TCACTCC-TCACTCC-TCACTCC | Design primers |
| 576180 | AACCACT-AATCACT-AATCACT-AATCACT-AATCACT-AATCACT | Design primers |
| 618846 | AGTGACTGGTGACTGGTGACTGGTGACTAGTGACTAGTGACT | Design primers |
| 738868 | GTGACTGGTGACTGGTAGCTGGTGACTGGTGACTGGTGACTGGTGACTGGTGACTGGTGACTGGTGACTGGTGACTGGTGACTGGTGACTGGTGACTGGTGACTGGTGACTGGTGACTGGTGACTGGTGACTGGTGACTGGTGACTGGTGACTGGTGACTGGTGACTGGTGACTGGTGACTGGTGACTGGTAGCTGGTGACTGGTAGCTG | Design primers |
| 739079 | TGACTGGTAGCTGG-TGACTGGTAGCTGG-TGACTGGTAGCTGG-TGACTGGTAGCTGG-TGACTGGTAGCTGG | Design primers |
| 739150 | AGCTGGT-AGCTGGT-AGCTGGT-AGCTGGT-AGCTGGT | Design primers |
| 1063827 | CCCCCCCTGCTCG-ACCCCCCTGCTCG-ACCCCCCTGCTCG-ACCCCCCTGCTCG-ACCCCCCTGCTCG-ACCCCCCTGCTCG | Design primers |
| 1112183 | TTCAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT | Design primers |
| 1112369 | AATCACC-AATCACC-AATCACC-AATCACC | Design primers |
| 1235131 | TCCCAAG-TGACAAG-TGACAAG-TGACAAG-TGACAAG-TGACAAG-TGACAAG-TGACAAG-TGACAAG-TGACAAG-TGACAAG-TGACAAG-TGACAAG-TGACAAG-TGACAAG-TGACAAG-TGACAAG-TGACAAG | Design primers |
| 1304659 | TGTCACC-AGTCACC-AGTCACC-AGTCACC-AGTCACC-AGTCACC | Design primers |
| 1349869 | AAAGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC-ACTGGTC | Design primers |
| 1350101 | CTGGACA-CTGGACA-CTGGACA-CTGGACA-CTGGACA-CTGGACA-CTGGACA-CTGGACA-CTGGACA-CTGGACA-CTGGACA-CTGGACA-CTGGACA | Design primers |
| 1350193 | ATGACAA-ATGACAA-ATGACAA-ATGACAA-ATGACAA-ATGACAA-ATGACAA-ATGACAA-ATGACAA-ATGACAA-ATGACAA-ATGACAA-ATGACAA-ATGACAA-ATGACAA | Design primers |
| 1591714 | ATTGGTG-ACTGGTG-ACTGGTG-ACTGGTG-ACTGGTG-ACTGGTG | Design primers |
| 1591757 | CTGGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA-CAAGTGA | Design primers |
| 1591821 | AAGGGACAAGTGACAAGTGACAAGGGACAAGGGACAAGGGACAAGGGACAAGCGACAAGCGAC | Design primers |
| 1607962 | CACCGAAACCGGCGG-CAGCGAAACCGGCGG-CAGCGAAACCGGCGG-CAGCGAAACCGGCGG-CAGCGAAACCGGCGG-CAGCGAAACCGGCGG-CAGCGAAACCGGCGG-CAGCGAAACCGGCGG-CAGCGAAACCGGCGG | Design primers |
| 1608098 | AGCAAAACCGGCGGC-AGCAAAACCGGCGGC-AGCAAAACCGGCGGC-AGCAAAACCGGCGGC-AGCAAAACCGGCGGC-AGCGAAACCGGCGGC | Design primers |
| 1608190 | CAAAACCCGCGGCAGCGAAACCCGCGGCAGCGAAACCCGCGGCAG | Design primers |
| 1611782 | CGAGGTT-CAAGGTT-CAAGGTT-CAAGGTT-CAAGGTT-CAAGGTT | Design primers |
| 1611829 | TTCAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT-GACAAGT | Design primers |
| 2034831 | TTGTCAC-TTGTCAC-TTGTCAC-TTGTCAC-TTGTCAC | Design primers |
| 2037624 | GTCACTT-ATCACTT-ATCACTT-ATCACTT-ATCACTT-ATCACTT | Design primers |
| 2114313 | ACAACCAA-ACAACCAA-ACAACCAA | Design primers |
| 2372253 | CCGAGGCCAAAC-CTGAGGCCAAAC-CTGAGGCCAAAC-CTGAGGCCAAAC | Design primers |
| 2372302 | GGAAGCCAAACC-GGAAGCCAAACC-GGAAGCCAAACC-GGAAGCCAAACC-GGAAGCCAAACC-GGAAGCCAAACC-GGAAGCCAAGCC-GGAAGCCAAACC-GGAAGCCAAACC-GGAAGCCAAACC-GGAAGCCAAGCC-GGAAGCCAAGCC-GGAAGCCAAGCC-GGAAGCCAAGCC-GGAAGCCAAGCC-GGAAGCCAAGCC-GGAAGCCAAGCC-GGAAGCCAAACC-GGAAGCCAAGCC-GGAAGCCAAGCC-GGAAGCCAAGCC-GGAAGCCAAGCC-GGAAGCCAAGCC-GGAAGCCAAGCC-GGAAGCCAAGCC-GGAAGCCAAGCC-GGAAGCCAAGCC-GAAAGCCAAACC | Design primers |
| 2411451 | TCTCTGTGG-TCTCTGTGG-TCTCTGTGG-TCTCTGTGG-TCTCTGTGG | Design primers |
| 2456271 | GACCAATCACCAATCACCAATCACCAATCACCAATCACCAGTCACCAATCACCAGTCACCAAT | Design primers |
| 2521827 | CCTTGGT-CCTTGGT-CCTTGGT-CCTTGGT | Design primers |
| 2521862 | CCTTGTC-ACTTGTC-ACTTGTC-ACTTGTC-ACTTGTC-ACTTGTC | Design primers |
| 2603198 | CACACCA-GTCACCA-GTCACCA-GTCACCA-GTCACCA-GTCACCA-GTCACCA-GTCACCA-GTCACCA-GTCACCA-GTCACCA-GTCACCA | Design primers |
| 2709277 | CAGCTCGGCTAC-CGGTTCGGCTAC-CGGTTCGGCTAC-CGGTTCGGCTAC-CGGTTCGGCTAC-CGGTTCGGCTAC-CGGTTCGGCTAC-CGGTTCGGCTAC-CGGTTCGGCTAC-CGGTTCGGCTAC | Design primers |
| 2709398 | GGTTCGGCTACC-GGTTCGACTACC-GGTTCGACTACC-GGTTCGGCTACC | Design primers |
| 2709447 | GTTCAGCGACCG-GTTCAGCGACCG-GTTCAGCGACCG-GTTCAGCGACCG-GTTCAGCGACCG-GTTCAGCGACCG-GTTCGGCGACCG | Design primers |
| 2709539 | ACCGGTTCGGCGACCGGTTCAGCGACCGGTTCAGCG | Design primers |
| 2764198 | CACCGGTTCTTCCACTACCGGTTCTTCCACTACCGGTTCTTCCACTACCGGTTCTTCCACCACCGGTTCTTCCACCACCGGTTCTTCCACCACCGGTTCTTCCACCACCGGTTCTTCCACCACCGGCTCTTCCACCACCGGCTCTTCCACCACCGGCTCTTCCACCACCGGCTCTTCCACCACCGGCTCTTCCACCACCGGCTCTTCCACCACCGGTTCTTCCACCACCGGTTCTTCCACCACCGGTTCTTCCACCACCGGTTCTTCCACCACCGGTTCTTCCACCACCGGTTCTTCCAC | Design primers |
| 2797420 | CGGACCA-GTGACCA-GTGACCA-GTGACCA-GTGACCA-GTGACCA-GTGACCA-GTGACCA-GTGACCA | Design primers |
| 2858583 | AAAAAACTAG-GAAAAACTAG-GAAAAACTAG | Design primers |
| 3064780 | GTGATTG-GTGATTG-GTGATTG-GTGATTG-GTGATTG | Design primers |
| 3445662 | CCAGTCA-CCAGTCA-CCAGTCA-CCAGTCA-CCAGTCA-CCAGTCA | Design primers |
| 3626672 | CCGTCCT-TGGTCCT-TGGTCCT-TGGTCCT-TGGTCCT-TGGTCCT-TGGTCCT-TGGTCCT-TGGTCCT-TGGTCCT-TGGTCCT-TGGTCCT | Design primers |
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