Microsatellites /Tandem Repeats database

Genome: Vibrio fischeri ES114

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
59160CCTGAAA-CCTGAAA-CCTGAAA-CCTGAAA-CCTGAAA-CCTGAAA-CCTGAAADesign primers
61361TCCTGAA-TCCTGAA-TCCTGAA-TCCTGAADesign primers
136109CCTGAAA-CCTGAAA-CCTGAAA-CCTGAAADesign primers
199791CTAGGTG-CTAGGTG-CTAGGTG-CTAGGTG-CTAGGTG-CTAGGTG-CTAGGTG-CTAGGTG-CTAGGTG-CTAGGTG-CTAGGTG-CTAGGTG-CTAGGTGDesign primers
208145AAATTAAA-AAATTAAA-AAATTAAA-AAATTAAADesign primers
223411CCTGAAA-CCTGAAA-CCTGAAA-CCTGAAA-CCTGAAA-CCTGAAA-CCTGAAA-CCTGAAA-CCTGAAA-CCTGAAA-CCTGAAADesign primers
286299TGATGGCGG-TGATGGCGG-TGATGGCGGDesign primers
315152CTAGTCC-CTAGTCC-CTAGTCC-CTAGTCC-CTAGTCC-CTAGTCCDesign primers
338243TGGTCA-TGGTCA-TGGTCA-TGGTCA-TGGTCADesign primers
651910TAGTCCC-TAGTCCC-TAGTCCC-TAGTCCCDesign primers
708189TAGACCC-TAGACCC-TAGACCC-TAGACCC-TAGACCC-TAGACCC-TAGACCCDesign primers
809808AGACCCT-AGACCCT-AGACCCT-AGACCCT-AGACCCT-AGACCCT-AGACCCT-AGACCCTDesign primers
852690TCCCTAG-TCCCTAG-TCCCTAG-TCCCTAG-TCCCTAG-TCCCTAGDesign primers
921170AGTTCCT-AGTTCCT-AGTTCCT-AGTTCCT-AGTTCCT-AGTTCCT-AGTTCCT-AGTTCCT-AGTTCCT-AGTTCCT-AGTTCCTDesign primers
1211953CTAGTCC-CTAGTCC-CTAGTCC-CTAGTCC-CTAGTCC-CTAGTCC-CTAGTCC-CTAGTCC-CTAGTCC-CTAGTCC-CTAGTCCDesign primers
1287383ATTGGCTAA-ATTGGCTAA-ATTGGCTAADesign primers
1657698ATTAGTCG-ATTAGTCG-ATTAGTCG-ATTAGTCGDesign primers
1954931AACTAGA-AACTAGA-AACTAGA-AACTAGA-AACTAGADesign primers
2050828AGGTTTC-AGGTTTC-AGGTTTC-AGGTTTC-AGGTTTCDesign primers
2127091GTTCTG-GTTCTG-GTTCTG-GTTCTGDesign primers
2521810AGGTTTC-AGGTTTC-AGGTTTC-AGGTTTC-AGGTTTC-AGGTTTC-AGGTTTC-AGGTTTC-AGGTTTC-AGGTTTC-AGGTTTC-AGGTTTC-AGGTTTCDesign primers
2521990GTCTCTA-GTCTCTA-GTCTCTA-GTCTCTA-GTCTCTADesign primers

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