Microsatellites /Tandem Repeats database

Genome: Nanoarchaeum equitans

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
71451AA-AG-AA-AA-GG-AA-AA-AA-TA-GA-AA-AA-ADesign primers
81240GAGAAAAAAGAAGAAAAAAAGGAAGAGAAGAAAGAGGADesign primers
149256TCTTCTTCCTCTTCTACTTCTTCATDesign primers
180933TTCTTCTTTCTTTTCCTCTTTTTTCTCCTCTTTCTTTTCTTCTTTCTTDesign primers
209649AG-AA-AA-AG-AA-AC-TG-AA-AA-AG-AA-AA-ADesign primers
238949TCATTAATAATTTCATTAACAATATCATTAACAACTTDesign primers
271721TT-TT-TG-TA-TT-TC-TT-GT-AT-TT-TA-TG-TA-TDesign primers
310303AATAGC-AATAGC-AGTAGC-ATTAGC-ADesign primers
314929ATAATCTTTTATACTCTTCTATAACCTTTTDesign primers
370115TAATAATACTAATAACAATAATACTADesign primers
449931AA-AT-GA-AG-AA-CT-AA-AA-AA-AG-AA-GA-AA-GA-AA-AA-AG-AA-AG-AA-AT-AA-AA-AADesign primers

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