Microsatellites /Tandem Repeats database

Genome: Streptococcus pyogenes strain MGAS8232

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
134755CTTGTTTTAGCTATTTTTAGCTTGTTTAACDesign primers
257697AATAAAAAAGTACAAAAAAAGTAAAAAAAGAGTDesign primers
290933ATCAAACAAAAATCAAAGAAACAACAAAGAAAADesign primers
359374ATGGCAAATAAAGGCAAGTAATGGCTGATADesign primers
584090ACGTTTTACAAAGTT-GTATTTTACAAAGTT-GTATTTTACAAAGTTDesign primers
594023CACAGTTAGAACAGTTACAACAGTTAGGACGGTTACAACAGTTAGAACAGTTACAACAGTTAGGACGGTTACDesign primers
805012ACAGCACCAGCAACAGTAGCAGCADesign primers
853834TGTGA-ACAAA-ACAAA-ACAAA-ACAAA-ACAAA-ACAAA-ACAAA-ACAAA-ACAAA-ACAAA-ACAAADesign primers
872357GCTGCTGCAGCTGCTGGTGGTGCTGDesign primers
877859AGAAAA-TGAAAA-GGAAAA-GGAAAA-ADesign primers
1026294AGTTAAGTGAAGTTAAATTAATTTADesign primers
1144796CTTCATTTTCATCCTCATGTTCATDesign primers
1230347ACTGTCATGCACTGTTATTCACTGTCAATCDesign primers
1237274TTGTTGATTAGCAAATTGCACATTAGCAAATTGCACATTAGCAAATTDesign primers
1244947CTTCATCTA-ATTCATCTA-ATTCATCTA-ATTCATCTADesign primers
1416960TTTTCAAACTTTTCAAAGTTTTCAAGCDesign primers
1432014TGTTT-GTTTT-TGTTT-TGTTT-ATTTT-GTTTTDesign primers
1455766CATTGTTTT-GATTGTTTT-GATTGTTTTDesign primers
1487051TA-TT-CT-TT-CT-CT-TT-AT-CT-AA-CT-CT-TT-CT-CT-TT-AT-CT-AA-CT-CT-CT-CT-CT-TT-AT-CT-AA-CT-CT-CT-CT-CT-TT-AT-CTDesign primers
1549290GGTTTTGGCTGGTCAGTT-GGTTTCGAATGGTCAGTT-GGTTTCGAATGGTCAGTT-GGTTTCGAATGGTCAGTT-GDesign primers
1626919TTC-TTC-ATC-TTC-TTC-ATC-TTC-TTC-GTC-TTC-TTCDesign primers
1653110CTTTTTCCACCTTTTCCACTTATTCCADesign primers
1735934TTTTTCTGGTTTAGTTTCTGGTTTTTTGTCTGGTGTTTDesign primers

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