Microsatellites /Tandem Repeats database

Genome: Wolbachia endosymbiont of Drosophila melanogaster

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
11304TGGGATGATATAGGATAATATGGGATGAAGDesign primers
37525CCGCGGCGGTATGACGGTTCGCAGTGGTATGACGGTTCGCGGCGGGATGACGATDesign primers
60616GAAAAAGAAAAGGAAGAAGAAACADesign primers
218210ACCTTCTGTCATCCCAGTTTCCCCCTCTGTCATCCCAGTCTCTTCTTCTGTCATCCCAGTGCCDesign primers
252289TAAAAAGTCAAAAAAAGTGAGAAGAAGTCADesign primers
329220ATATTATGTGAGATAATGTGAGATAATGTGATADesign primers
493485AAAAGGTAAAAT-TGAAGGTAAAAT-TGAAGGTAAAATDesign primers
522196TGAATAATTGTTAATAATAGTGTATAATTATDesign primers
525324GGTAAAGAGGAA-GGAAAAATCGAA-GGAAAAATCGAA-GGAAAAATCGAA-GGAAAAATCGAA-GGAAAAATCGAA-GDesign primers
585168TTTACTATTATTTTATATTATCTATTATTATTTATTACTATTDesign primers
657648CCTTAACTTCCTTGACTTCCTTGACTTDesign primers
797429TGTTTTTGTTTCTGTATTTGTTGTTDesign primers
950677TGAATAATTGTTAATAATAGTGTATAATTATDesign primers
978934CTGCCGCGAACCGTCATACCGCCACGAACTGTCATACCACCACGAACCGTCATACDesign primers
1088642CCTTTCTCTATACCTTTTTGTATACCTTTCTCTTCADesign primers
1176246ATAGAAAAAGAAATAGGAATGGAADesign primers
1241289CACTTTCTTCACTCTCTTCACTTTCTTCDesign primers
1243846ATTTCATCATCTATTTCACCATCCACTTCATAATCTDesign primers
1244602TTATTAAATATTATAACATAATATTTAATATDesign primers

Please help us improve this resource by reporting problems, suggestions etc.