This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 599872 | TTAGCAA-CAAGCAA-CAAGCAA-CAAGCAA-CAAGCAA-CAAGCAA-CAAGCAA-CAAGCAA-CAAGCAA | Design primers |
| 650087 | ATTCGCAG-CTTCGCAG-CTTCGCAG-CTTCGCAG-CTTCGCAG-CTTCGCAG | Design primers |
| 728156 | TATAT-AATAT-AATAT-AATAT-AATAT-AATAT | Design primers |
| 778540 | CAGCTGCG-AGGCTGCG-AGGCTGCG-AGGCTGCG-AGGCTGCG-AGGCTGCG-AGGCTGCG-AGGCTGCG-AGGCTGCG | Design primers |
| 817101 | AAAGA-AAAGA-AAAGA-AAAGA-AAAG | Design primers |
| 1000283 | TTCGCAGCCTCGCAGCCTCGCAGCCTCGCAGCCTCGCAGCCTCGCAGCCTCGCAGCCTCGCAGCT | Design primers |
| 1481467 | AGACAAAC-AGACAAAC-AGACAAAC-AGACAAA | Design primers |
| 1481499 | AGACAAAG-AGACAAAG-AGACAAAG-AGACAAA | Design primers |
| 1787100 | ATTTTTA-ATTTTTA-ATTTTTA-ATTT | Design primers |
| 2269656 | CT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT | Design primers |
| 2297670 | CTTTGTT-GCTTGTT-GCTTGTT-GCTTGTT-GCTTGTT-GCTTGTT-GCTTGTT-GCTTGTT-GCTTGTT-GCTTGTT-GCTTGTT-GCTTGTT | Design primers |
| 2788824 | TTAGCAA-CAAGCAA-CAAGCAA-CAAGCAA-CAAGCAA-CAAGCAA-CAAGCAA-CAAGCAA-CAAGCAA-CAAGCAA-CAAGCAA-CAAGCAA-CAAGCAA-CAAGCAA-CAAGCAA-CAAGCAA-CAAGCAA-CAAGCAA | Design primers |
| 2798323 | TGAATATTATC-TAAATATTATC-TAAATATTATC-T | Design primers |
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