Microsatellites /Tandem Repeats database

Genome: Bordetella bronchiseptica

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
890569CAAGGACAAGGG-CAAGGACAAGGG-CAAGGACAAGGG-CAAGGACDesign primers
1039397CCATGCCGC-CCATGCCGC-CCATGCCGC-CDesign primers
1461408GCGCTGGGC-GCGCTGGGC-GCGCTGGGC-GCDesign primers
1936772CCGGCCAGCCCGGCG-CCGGCCAGCCCGGCG-CCGGCCAGCCCGGCG-CCGGCCDesign primers
1936859GCCGCGCCCGCC-GCCGCGCCCGCC-GCCGCGCCCGCC-GCCGCGDesign primers
2179500CC-CC-CC-CC-CC-CC-CC-CC-CC-CC-CC-CC-CC-CC-CC-CC-CC-CDesign primers
2746453GCGGCCGGC-GCGGCCGGC-GCGGCCGGCDesign primers
2746647GGCGGCGTC-GGCGGCGTC-GGCGGCGTC-GGCGGCDesign primers
2760706CTGGTG-CTGGTG-CTGGTG-CTGGTGDesign primers
3185056GCGGGC-GCGGGC-GCGGGC-GCGGGC-GCGGGC-GCGGGCDesign primers
3921210CTTGCTTTTCG-CTTGCTTTTCG-CTTGCTTTTCG-CTDesign primers
3992768GAAACGGCTCCGGTC-GAAACGGCTCCGGTC-GAAACGGCTCCGGTC-GAAACGGCDesign primers
4479695CCCTGCCGCA-CCCTGCCGCA-CCCTGCCGCA-CCCTGCCGCADesign primers
4479736CCTGCCGCAT-CCTGCCGCAT-CCTGCCGCAT-CCTGCDesign primers
5084669CCAGCCGG-CCAGCCGG-CCAGCCGG-CCDesign primers
5311199GCCGGC-GCCGGC-GCCGGC-GCCGGC-GDesign primers

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