This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 64020 | CCTGGACGGTGCTAC-CCTGGACGGTGCTAC-CCTGGACGGTGCTAC-C | Design primers |
| 271421 | AAGGTG-AAGGTG-AAGGTG-AAGGTG-AAGGTG-AAGGTG-AAGGTG-AAGGTG-AAGGTG-AA | Design primers |
| 1520732 | TGCAAA-TGCAAA-TGCAAA-TGCAAA-TG | Design primers |
| 2051837 | AGCAGAAC-AGCAGAAC-AGCAGAAC-AGCAGAAC-A | Design primers |
| 2161418 | GGGCCTGCC-GGGCCTGCC-GGGCCTGCC-GG | Design primers |
| 2212141 | GGGCCTGCC-GGGCCTGCC-GGGCCTGCC-GG | Design primers |
| 2862027 | GACCAC-GACCAC-GACCAC-GACCAC-GA | Design primers |
| 3490390 | AAATAG-AAATAG-AAATAG-AAATAG-AAATAG-AAATAG-AAATAG-AAATAG-AAATAG-AAATA | Design primers |
| 3491790 | TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGC | Design primers |
| 4432481 | CCGCCAGCA-CCGCCAGCA-CCGCCAGCA-CCGCCAGCA | Design primers |
| 4781564 | GGTGCA-GGTGCA-GGTGCA-GGTGCA-GGTGCA-GGT | Design primers |
| 5061674 | AGCCGA-AGCCGA-AGCCGA-AGCCGA-AGCCGA-AGCCGA-AGCCGA-AGCCGA-AGCCG | Design primers |
| 5295258 | AAAGTGCTATGCAGTAA-AAAGTGCTATGCAGTAA-AAAGTGCTATGCAGTAA | Design primers |
| 5331541 | CAGAAGTTAAATAATCTA-CAGAAGTTAAATAATCTA-CAGAAGTTAAATAATCTA-CAGAAGTTAAATAAT | Design primers |
| 5331631 | CAGGAGTTAAATAATTCG-CAGGAGTTAAATAATTCG-CAGGAGTTAAATAATTCG-CAGGAGTTAAATAA | Design primers |
| 5426060 | TATCTT-TATCTT-TATCTT-TATCTT-TATCTT-TATCTT-TATCTT-TATCTT-TA | Design primers |
|
Please help us improve this resource by reporting problems, suggestions etc.