Microsatellites /Tandem Repeats database

Genome: Methanothermobacter thermoautotrophicus str. Delta H

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
242102GTTTCTTTTTCTGGTTCTGTTTCTDesign primers
288310ATCAG-TCCAG-TCCAG-TCCAG-TCCAG-TCCAGDesign primers
402300TGTTTTTTTGTTCTTTTTTGTGTTTGTTTGDesign primers
482296TAGGTCTTC-TTGTACTTC-TTGTACTTC-TTGTACTTC-TTGTACTTC-TTGTACTTCDesign primers
603389AGGGAACACCAC-CAGGAACACCAC-CAGGAACACCACDesign primers
943225CCGGAAAACCTGAAAACCGGAATADesign primers
984210TAAAAAAATAACAAAATAAAAAAADesign primers
1085231TCATTGAA-TCACTGAA-TCACTGAA-TCACTGAA-TCACTGAADesign primers
1186485TTCCTCTTCTTCTTTCTCTTCCCCDesign primers
1265778TTCATGCTCATGTTCGTGTTCATGDesign primers
1327420ATGTTAAAAAAGGTTAATAAATGTTTACAADesign primers
1337240GTTATAACTTATAAGATATAACTTATAADesign primers
1362086TTATAACTTATAAGTTCTAACTTATAATDesign primers
1539605TGA-AGA-GGA-AGA-AGA-AGA-GGA-AGADesign primers
1539897AGC-AGC-AGC-ACC-AGC-AGC-AGC-TGC-AGC-ACC-AGC-AGCDesign primers

Please help us improve this resource by reporting problems, suggestions etc.