Microsatellites /Tandem Repeats database

Genome: Helicobacter pylori 26695

Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
0TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTATDesign primers
6590ATT-AGT-AGT-AGT-AGT-AGT-AGT-AGTDesign primers
7217AG-CG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AGDesign primers
32365GCCAAGTA-GCCAAGTA-GCCAAATADesign primers
85868ATAACACGGATACCGGCAACACGGACACCGGCAATACGGATACCGDesign primers
86110ATGGGGGATATGGGCGATATGGGGAATDesign primers
94210TTTCTTCGTTTTCTTCATCTTCTTCGTDesign primers
94872TTGTTTTCTTTAGTTTTATTTTCTTDesign primers
128468TATTTAATGAAATCTTTCTGT-GTTTTAACCAAATCTTTCTGT-TCTTTAACCAAATCTTTCTGT-TCTTTAACCAAATCTTTCTGT-TCTTTAACCAAATCTTTCTGT-TCTTTAACCAAATCTTTCTGTDesign primers
130033GCTTGTCTTTTGTTTTTCCTG-TTCTGTCTTTTGTTTTTCTTG-TTCTGTCTTTTGTTTTTCTTG-TTCTGTCTTTTGTTTTTCTTGDesign primers
130169TTGCTTGTCTTTTGTTTTTCT-TGTTCTGTCTTTTGTTTTTCT-TGTTCTGTCTTTTGTTTTTCT-TGTTCTGTCTTTTGTTTTTCTDesign primers
130307TT-GC-TT-GT-CT-TT-TG-TT-TT-TC-TT-GT-TC-TG-TC-TT-TT-GT-TT-TT-CT-TG-TT-CT-GT-CT-TT-TG-TT-TT-TC-TDesign primers
177344TTCTTTCTCTTT-AGCCTCCTCTTT-AGCCTCCTCTTT-AGCCTCCTCTTT-AGCTTCCTCTTT-AGTCTCCTCTTTDesign primers
214473AC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TC-TCDesign primers
292824CCCTAATATCCCCAATATCCCTAATATDesign primers
320902GATGGGGGCGATGGAGGCGATGGAGGCDesign primers
338669GAGTTTCTTTAACCTCTTCTTTTT-CTTCTTCTTTAACCTCTTCTTTTT-CTTCTTCTTTAACCTCTTCTTTTT-CTTCTTCTTTAACCTCTTCTTTTTDesign primers
352845AGAAACAAGAAAAACAAGACAAACAAGDesign primers
444398AGCGTTGC-TTGATTGC-TTGATTGC-TTGATTGC-TTGATTGC-TTGATTGC-TTGATTGC-TTGATTGC-TTGATTGCDesign primers
444483TGCTTGAATGATCGGATGGTTGAATGATTGAATGATTGGATGATTGGADesign primers
444532GGTTGAAT-GGTTGAAT-GGTTGAAT-GGTTGAATDesign primers
444766AAGCTTTATTTATTTA-AAGCTTTATTTATTTA-AAGCTTTATTTATTTA-AAGCTTTATTTATTTA-AAGCTTTATTTATTTA-AAGCTTTATTTTTTAADesign primers
452093ATAGAAATAGATTTAGAAAAAGAADesign primers
453366ATAGTGATAGCGATAATGATACTGDesign primers
509019AAACCCAAACTCAAAACCAAACACDesign primers
557142GCTTTTTTTAGCTTCTTCTAACTTTTTTTTDesign primers
557694GCTTTTTTTAGCTTCTTCTAACTTTTTTTTDesign primers
560456CTTTTCTTCTCTTATTTTTTCTTTGDesign primers
561060TC-TT-TT-CT-TT-TT-TC-TC-TT-TT-AT-CT-TT-TTDesign primers
608112GCGTTTATGCGTTTGTGCGGTTATDesign primers
613481TTTCTGCTCTACTTTTTGTTCTACTTTCTGCTCTACDesign primers
613607TTTGGGTTCAGGTTTGGGTTTTGGTTTAGGCTCAGGDesign primers
613663TTGGCGGGG-TTGGCGGGG-TTGGCGGAGDesign primers
667976ATTTGGGCGATT-TTTTGGGCGATT-TTTTGGGCGCTTDesign primers
684215CCATAAGGCATGAAACCATAGGGCATGTAATAATAAGGCATGTAADesign primers
696784CCGGTCATAATTAACCCTCAA-ATCATCATAATTAACCCTCAA-ATCATCATAATTAACCCTCAA-ATCATCATAATTAACCCTCAA-ATCATCATAATTAACCCTCAA-ATCATCATAATTAACCCTCAA-ATCATCATAATTAACCCTCAA-ATCATCATAATTAACCCTCAA-ATCATCATAATTAACCCTCAA-ATCATCATAATTAACCCTCAADesign primers
700851GAATCTCAAAAAAATGAAGCTCCAAAAAATGAAGTTCAAAGAAATGAAGCTCAAAAAGAADesign primers
707405AAGAATTGAAGAATAAGGATTTGAAAAATAAAGAATTGAAAAATADesign primers
722207TTTTGAAACATTTTTGAAAGTTTTTTGAAAATTDesign primers
771064TTTCTATTTGTTCTATTTTTTCTCTTTTTTCTATATDesign primers
789316CCACGCTCCAGCCACGCTTTAGCCACGCTTTAGDesign primers
816389AAAATTCTCAAAAATCTCAAGATTCTCDesign primers
823943AACAAAAACAACAAAAAAAACAATDesign primers
824785TTCTTTTTTAGGAAT-TTCTTTTTTAGGAAT-TTCTTTTTTAGTGCTDesign primers
846254GCTTTTAATTCT-GTGTTTAATTCT-GTGTTTAATTCT-GTGTTTAATTCTDesign primers
900536GCTTTTAATTCTGTGTTTAATTCTGTGTTTAATTCTDesign primers
949664CG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AG-AGDesign primers
953428AAAAATTTCTTATAGATTTCTTAAACAATTCTTDesign primers
973363TTCTTCTTTTTCTTCTTCTTCTTTDesign primers
981126CAA-CAA-CAA-AAA-CAA-CAA-CAA-AAA-CAA-GAA-CAA-CAADesign primers
1022167CTTGATGGTTGTTTTGGTGGTTGTCTTGGTGGTTTTDesign primers
1118942AGAGATATTTTCTTCAGTCATATTTCCTTCAGTCGTATTTTCTTCDesign primers
1122968GATAACGAAAATAACAACGAAAATAATAACGAAAATDesign primers
1151825AGAAGAAATGATAGAAGGAAGGATAGAAGAAATGATDesign primers
1160402TTTTCTAAATTTTCTAAGGTTTCTAAADesign primers
1257324GGTCTTTTGTTTTTCTTGTTCTGTCTTCTGTCTTTCTTGTTCTGTTTTCTGTCTTTCTTGTTCTGTTTTCTGTTGTTCTTGTTCDesign primers
1310324TAACCCATATAAACCATATAAGCCATADesign primers
1331240AACAGAATGAAAAGAATGAAAAGAATGDesign primers
1364477GGGGGGAGCTGTTGGTGGTGCAATTGGGGGTGGTGTTGGTGGTGCAGTGGGGGGAGCTGTTGGTGGTCCTGCDesign primers
1382514TAGTTATT-ATGTATTT-ATGTATTT-ATGTATTT-ATGTATTT-ATGTATTT-ATGTATTT-ATGTATTT-ATGTATTTDesign primers
1394837ATTTGAGCGGTGGTTTAAGCGGTGATTTGAGCGGTGDesign primers
1400125AACCCAAGAAAGAAGAGCCAAAAAAAGAAGAACCCAAAAAGGAGGDesign primers
1444150GCAAAAATGAAAAAA-GCGAAGATCAAAAAA-GCGAAGATCAAAAAA-GCGAAAATCAAAAAADesign primers
1445738TAAAGTAAAATGATGTAAAATAATTTAAAADesign primers
1477278GTTAAAAAATAAAGCT-TTAAATAAATAAAGCT-TTAAATAAATAAAGCT-TTAAATAAATAAAGCT-TTAAATAAATAAAGCT-TTAAATAAATAAAGCTDesign primers
1477575GCATTCAA-CCATTCAA-CCATTCAA-CCATTCAADesign primers
1477608CATCCAAT-CATCCAAT-CATTCAATDesign primers
1477643CCGATCAT-TCAAGCAA-TCAAGCAA-TCAAGCAA-TCAAGCAA-TCAAGCAA-TCAAGCAA-TCAAGCAA-TCAAGCAA-TCAAGCAA-TCAAGCAA-TCAAGCAADesign primers
1508335AAGCTA-AGTCTA-AGTCTA-AGTCTA-AGTCTA-AGTCTADesign primers
1522061AAAACCTAAACCTAAACCAAAGCCCAAACCDesign primers
1588956AAGCGTTTCAAAAGCGTCTTAACAGCGTTTTAADesign primers
1603376GCATTTCAATGTATTTTAATGCATTTAAATDesign primers
1609675ATAGTTTAATAATTTAATAGTTTADesign primers
1645903TATCGTTTTATCTTTTTATCATTTDesign primers

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