Microsatellites /Tandem Repeats database

Genome: Escherichia coli K-12 substr. W3110

Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
59052GTGCTACCCCGGACG-GTGCTACCCCGGACG-GTGCTAACCCGGACGDesign primers
1200013AATGAAAT-AATGAAAT-AATGAAATDesign primers
1200038ATGAAATG-ATGAAATG-ATGAAATG-ATGAAATG-ATGAAATGDesign primers
2764066CGCACTAT-GGCACTAT-GGCACTAT-GGCACTAT-GGCACTAT-GGCACTATDesign primers
4480687AGTTAAATAATCTACAGAAATTAAATAATCTACAGAAGTTAAATAATCTACTGADesign primers

Please help us improve this resource by reporting problems, suggestions etc.