In silico restriction map and PFGE


Genome: Escherichia coli str. K-12 substr. MG1655
Length of genome: 4639675 bp
Restriction Enzyme: XbaI
Recognition sequence: T'CTAG_A
Number of Cleaves: 39

Simulate PFGE for all Escherichia
info



Cleavage PositionLength of sequenceLength of sequence (sorted)PFGE
105745
211508
245046
569011
823655
896214
1158347
1170870
1170989
1173056
1442601
1469104
1717522
1729745
1944608
1984308
2078366
2127190
2148965
2197382
2532390
2687687
2701768
2730755
2759293
2965917
3405976
3555186
3672477
3778542
3836232
3915785
4140722
4182124
4282902
4480050
4546933
4552988
4639673
105747
105763
33538
323965
254644
72559
262133
12523
119
2067
269545
26503
248418
12223
214863
39700
94058
48824
21775
48417
335008
155297
14081
28987
28538
206624
440059
149210
117291
106065
57690
79553
224937
41402
100778
197148
66883
6055
86685

440059
335008
323965
269545
262133
254644
248418
224937
214863
206624
197148
155297
149210
117291
106065
105763
105747
100778
94058
86685
79553
72559
66883
57690
48824
48417
41402
39700
33538
28987
28538
26503
21775
14081
12523
12223
6055
2067
119






































































All data are shown as number of nucleotides.