In silico restriction map and PFGE

Restriction Enzyme: XbaI

Recognition sequence: T'CTAG_A
Genera: Escherichia

Results are not available when the number of fragments is over 50.
Place cursor over bands to show the genome.

	1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42	43	44	45	46	47	48	49	50	51	52	53	54	55	56	57	58	59	60	61	62	63	64	65
No. Bands	(32)	(34)	(46)	(42)	(38)	(37)	(37)	(32)	(35)	(27)	(26)	(26)	(28)	(36)	(46)	(38)	(38)	(31)	(26)	(46)	(43)	(31)	(31)	(40)	(31)	(40)	(39)	(76)	(29)	(44)	(28)	(34)	(37)	(37)	(32)	(34)	(40)	(43)	(40)	(42)	(36)	(40)	(36)	(36)	(30)	(50)	(37)	(34)	(32)	(30)	(30)	(37)	(46)	(44)	(38)	(37)	(37)	(39)	(36)	(23)	(39)	(40)	(37)	(37)	(28)

Compute Dice distance and UPGMA clustering

Compute Pearson distance and UPGMA clustering

Show bands

(32)

(34)

(46)

(42)

(38)

(37)

(37)

(32)

(35)

(27)

(26)

(26)

(28)

(36)

(46)

(38)

(38)

(31)

(26)

(46)

(43)

(31)

(31)

(40)

(31)

(40)

(39)

(76)

NA

(29)

(44)

(28)

(34)

(37)

(37)

(32)

(34)

(40)

(43)

(40)

(42)

(36)

(40)

(36)

(36)

(30)

(50)

(37)

(34)

(32)

(30)

(30)

(37)

(46)

(44)

(38)

(37)

(37)

(39)

(36)

(23)

(39)

(40)

(37)

(37)

(28)

All data are shown as number of nucleotides.
NA: simulation is not available

1. Escherichia blattae DSM 4481
2. Escherichia coli 0127:H6 E2348/69
3. Escherichia coli 042
4. Escherichia coli 536
5. Escherichia coli 55989
6. Escherichia coli ABU 83972
7. Escherichia coli APEC O1
8. Escherichia coli APEC O78
9. Escherichia coli ATCC 8739
10. Escherichia coli B str. REL606
11. Escherichia coli BL21(DE3)
12. Escherichia coli BL21(DE3)
13. Escherichia coli BL21-Gold(DE3)pLysS AG
14. Escherichia coli BW2952
15. Escherichia coli CFT073
16. Escherichia coli DH1
17. Escherichia coli DH1
18. Escherichia coli E24377A
19. Escherichia coli ED1a
20. Escherichia coli ETEC H10407
21. Escherichia coli HS
22. Escherichia coli IAI1
23. Escherichia coli IAI39
24. Escherichia coli IHE3034
25. Escherichia coli JJ1886
26. Escherichia coli K-12 substr. W3110
27. Escherichia coli KO11FL
28. Escherichia coli KO11FL
29. Escherichia coli LF82
30. Escherichia coli LY180
31. Escherichia coli NA114
32. Escherichia coli O103:H2 str. 12009
33. Escherichia coli O104:H4 str. 2009EL-2050
34. Escherichia coli O104:H4 str. 2009EL-2071
35. Escherichia coli O104:H4 str. 2011C-3493
36. Escherichia coli O111:H- str. 11128
37. Escherichia coli O157:H7 EDL933
38. Escherichia coli O157:H7 str. EC4115
39. Escherichia coli O157:H7 str. Sakai
40. Escherichia coli O157:H7 str. TW14359
41. Escherichia coli O26:H11 str. 11368
42. Escherichia coli O55:H7 str. CB9615
43. Escherichia coli O55:H7 str. RM12579
44. Escherichia coli O7:K1 str. CE10
45. Escherichia coli O83:H1 str. NRG 857C
46. Escherichia coli P12b
47. Escherichia coli PMV-1
48. Escherichia coli S88
49. Escherichia coli SE11
50. Escherichia coli SE15
51. Escherichia coli SMS-3-5
52. Escherichia coli UM146
53. Escherichia coli UMN026
54. Escherichia coli UMNK88
55. Escherichia coli UTI89
56. Escherichia coli W
57. Escherichia coli W
58. Escherichia coli Xuzhou21
59. Escherichia coli str. K-12 substr. DH10B
60. Escherichia coli str. K-12 substr. MDS42 DNA
61. Escherichia coli str. K-12 substr. MG1655
62. Escherichia coli str. K-12 substr. W3110
63. Escherichia coli str. clone D i14
64. Escherichia coli str. clone D i2
65. Escherichia fergusonii ATCC 35469